Package: presto
Title: Fast Functions for Differential Expression using Wilcox and AUC
Version: 1.0.0
Authors@R: c(
    person("Ilya", "Korsunsky", email = "ilya.korsunsky@gmail.com", 
        role = c("aut"), comment = c(ORCID = "0000-0003-4848-3948")),
    person("Aparna", "Nathan", 
        role = "aut"),
    person("Nghia", "Millard", 
        role = "aut", comment = c(ORCID = "0000-0002-0518-7674")),
    person("Soumya", "Raychaudhuri", 
        role = c("aut"), comment = c(ORCID = "0000-0002-1901-8265")),
    person("Kamil", "Slowikowski", email = "kslowikowski@gmail.com",
        role = c("cre", "ctb"), comment = c(ORCID = "0000-0002-2843-6370")),
    person("Austin", "Hartman",
        role = c("ctb"), comment = c(ORCID = "0000-0001-7278-1852"))
    )
Description: Scalable implementation of the Wilcoxon rank sum test and
        auROC statistic. Interfaces to dense and sparse matrices, as
        well as genomics analysis frameworks Seurat and
        SingleCellExperiment.
License: GPL-3
LazyData: true
Encoding: UTF-8
Depends: R (>= 3.5.0), Rcpp, data.table
LinkingTo: Rcpp, RcppArmadillo
biocViews:
Imports: dplyr, methods, tidyr, purrr, tibble, Matrix, rlang, stats,
        utils
RoxygenNote: 7.3.3
Suggests: knitr, rmarkdown, testthat, Seurat, SingleCellExperiment,
        SummarizedExperiment, broom, BiocStyle, DESeq2
NeedsCompilation: yes
VignetteBuilder: knitr
Config/pak/sysreqs: libicu-dev
Repository: https://satijalab.r-universe.dev
Date/Publication: 2026-05-05 19:55:32 UTC
RemoteUrl: https://github.com/immunogenomics/presto
RemoteRef: HEAD
RemoteSha: a24772a135c7895a8183b007376050556c60a05b
Packaged: 2026-07-04 05:26:01 UTC; root
Author: Ilya Korsunsky [aut] (ORCID: <https://orcid.org/0000-0003-4848-3948>),
  Aparna Nathan [aut],
  Nghia Millard [aut] (ORCID: <https://orcid.org/0000-0002-0518-7674>),
  Soumya Raychaudhuri [aut] (ORCID:
    <https://orcid.org/0000-0002-1901-8265>),
  Kamil Slowikowski [cre, ctb] (ORCID:
    <https://orcid.org/0000-0002-2843-6370>),
  Austin Hartman [ctb] (ORCID: <https://orcid.org/0000-0001-7278-1852>)
Maintainer: Kamil Slowikowski <kslowikowski@gmail.com>